REUBEN S. MAGHEMBE
Pathogen genomics · Antimicrobial resistance Bioinformatics · Translational omics
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RESEARCH PROJECTS

Research Programmes & Scientific Directions

A portfolio of work across tuberculosis and malnutrition, pathogen genomics, antimicrobial resistance, One Health, bioprospecting, microbial biotechnology and computational molecular discovery.

CORE THEMES

Genomics, omics and translational discovery.

RESEARCH ORIENTATION

These projects connect molecular evidence with infectious disease biology, antimicrobial resistance, One Health transmission, African biological resources and computational approaches for discovery-oriented biomedical science.

Postdoctoral research

Tuberculosis, Malnutrition & Omics-Guided Host–Pathogen Biology

Postdoctoral work examining tuberculosis and malnutrition within a Kibongoto Infectious Disease Hospital–University of Virginia NIH-funded programme. The research direction links infection, nutrition, metabolic health and omics-based discovery.

Active research direction

Pathogen Genomics & Antimicrobial Resistance in East Africa

Comparative genomic and phylogenomic studies of clinically important bacterial pathogens, including Klebsiella, Escherichia coli, Citrobacter, Pseudomonas and Staphylococcus aureus, with emphasis on antimicrobial resistance, virulence, sequence types, mobilomes and genomic epidemiology.

Developing programme

One Health Klebsiella Genomics & Environmental Transmission

One Health Klebsiella Transmission ecology

Development of One Health genomic approaches linking clinical, animal and environmental reservoirs to understand antimicrobial resistance movement, strain diversity and transmission ecology in Tanzania and the wider East African context.

Discovery science

Bioprospecting, Microbial Biotechnology & Molecular Discovery

Omics-guided exploration of African microbiomes and thermophilic systems for enzymes, DNA polymerase and DNA-binding protein isoforms, antimicrobial leads and biotechnology-relevant molecular resources.

Computational research

Computational Biology & Structure-Guided Molecular Discovery

Use of molecular docking, pathway-level target prioritisation, comparative conservation and integrative computational biology to identify potential anti-infective molecules and generate mechanistic hypotheses.